Saturday, October 23, 2010
Molecular Biology software
Visual OMPTM: The industry's most accurate and comprehensive software for secondary structure analysis plus design and simulation of probes / primers, RT-PCR, Taqman, Multiplex PCR, late-PCR, Scorpions, Beacons, allele-specific and FRET assays, microarrays, RNAi, and new formats. Unique is good for PCR buffer additives, fluorophores, quenchers, and plus more ...
OMP Developer EditionTM: This Software brings customizable, command line, high-throughput OMPTM (Oligonucleotide Modeling PlatformTM) software engine to power your big test design project or enterprise application. Fits easily into the existing bioinformatics pipelines.
ThermoBLASTTM: Better than BLAST for the control test designs. Combines the capabilities of BLAST database with the exact thermodynamics of OMPTM. Quickly and accurately scans DNA, RNA, or modified oligonucleotides against large genome databases and found thermodynamically stable hybridization and thus eliminates off-target effects testing and false positives. Available as a module for Visual OMPTM or individual, command line, Developer EditionTM version.
ModifiedsTM: Expanding the power of thermonuclear blast and OMP ™ ™ (in both the Windows and command line version) of modified nucleotides (eg LNA, 5-methylcytosine DNA, 2'-O-methyl RNA, plus many more). Makes (1) to predict secondary structure plus design and simulation of oligos with modified nucleotides, and (2) scanning of modified oligos against genomic hybridization to all sites and databases expandable to identify amplicons.
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